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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39234946_39235407_F

Intron Information:

Intron Rank:

147871

Intron Class:

major

Intron Phase:

Intron Coordinates:

39234946 - 39235407

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CCATGTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

80.6

33.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.76

0.7

77.1

31.6

Minor 5ss

33.5

-1.9

3.1

41.3

44.8

Minor BPS

55.8

0.26

1.8

67.65

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031299

39232513 - 39236245

3733