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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39288759_39290935_R

Intron Information:

Intron Rank:

139505

Intron Class:

major

Intron Phase:

Intron Coordinates:

39288759 - 39290935

Intron Length:

2177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTAA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTTGTTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

71.3

37.1

Major BPS

84.8

0.86

85.7

34.9

Major PPT

92.5

0.96

0.7

87.5

Minor 5ss

-0.7

2.9

58.2

46.4

Minor BPS

61.2

0.34

2.1

78.96

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028626

39256141 - 39291030

34890