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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39291031_39293667_R

Intron Information:

Intron Rank:

139508

Intron Class:

major

Intron Phase:

Intron Coordinates:

39291031 - 39293667

Intron Length:

2637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CTTTTCTAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

33.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

93.6

0.98

0.6

92.3

Minor 5ss

-1.6

3.2

48.9

46.9

Minor BPS

62.6

0.47

1.8

80.39

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040706

39289938 - 39293919

3982