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Intron Name: Anas_platyrhynchos_platyrhynchos_2_3952524_3964326_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3952524 - 3964326

Intron Length:

11803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTAATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

SLFEHYDVCQVGCYLKTPKY

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.9

0.74

0.8

83.1

32.2

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

MINDY4

Ensembl Gene ID:

ENSAPLG00000011415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034180

3927862 - 4019824

91963

ENSAPLT00000011886

3943432 - 4019824

76393