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Intron Name: Anas_platyrhynchos_platyrhynchos_2_3964489_3966745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3964489 - 3966745

Intron Length:

2257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTCATAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

LIGSHGYCTQELVNLLLTGK

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

61.7

0.26

1.1

56.3

42.3

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

MINDY4

Ensembl Gene ID:

ENSAPLG00000011415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034180

3927862 - 4019824

91963

ENSAPLT00000011886

3943432 - 4019824

76393