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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39645640_39646267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39645640 - 39646267

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGTGTCAG

5'SS Class:

major

3'SS Sequence:

TTTCTTGCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTTAT

U12 Branch Point Sequence:

ATGTCACTACAT

Flanking Amino Acid:

QKAVSSEGSLRGVIAYISSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.4

0.27

1.1

51.3

41.4

Major BPS

68.8

0.47

1.3

59.6

46.8

Major PPT

77.9

0.63

0.8

77.4

31.3

Minor 5ss

35.5

-1.6

2.8

36.7

41.6

Minor BPS

44.1

-0.3

2.2

65.86

Associated Gene:

Gene:

NR1D2

Ensembl Gene ID:

ENSAPLG00000005753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006007

39645302 - 39665128

19827