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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39649685_39651325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39649685 - 39651325

Intron Length:

1641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTCC

5'SS Class:

major

3'SS Sequence:

TCCTCCTTGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGACTTTAACT

Flanking Amino Acid:

KCLSVGMSRDAVRFGRIPKR

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

70.2

34.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.2

0.48

0.9

68.8

31.6

Minor 5ss

47.7

-0.2

2.4

59.1

40.8

Minor BPS

79.2

0.99

1.2

88.57

36.4

Associated Gene:

Gene:

NR1D2

Ensembl Gene ID:

ENSAPLG00000005753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045874

39639949 - 39666615

26667

ENSAPLT00000006007

39645302 - 39665128

19827