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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39876986_39878578_F

Intron Information:

Intron Rank:

144695

Intron Class:

major

Intron Phase:

Intron Coordinates:

39876986 - 39878578

Intron Length:

1593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCCCT

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAA

U12 Branch Point Sequence:

ACTACCTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

42.9

Major BPS

0.1

1.1

61.6

34.2

Major PPT

68.3

0.41

62.8

42.6

Minor 5ss

46.6

-0.3

2.8

66.1

Minor BPS

0.54

1.5

71.16

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044950

39876734 - 39878622

1889