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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39880177_39881090_F

Intron Information:

Intron Rank:

144694

Intron Class:

major

Intron Phase:

Intron Coordinates:

39880177 - 39881090

Intron Length:

914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

TGCTACATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

78.3

30.6

Major BPS

75.5

0.63

40.9

Major PPT

78.6

0.64

0.8

77.9

29.7

Minor 5ss

40.5

-1.1

2.7

50.4

46.1

Minor BPS

51.2

0.12

1.9

72.5

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044014

39876734 - 39881309

4576