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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39925383_39927178_F

Intron Information:

Intron Rank:

136758

Intron Class:

major

Intron Phase:

Intron Coordinates:

39925383 - 39927178

Intron Length:

1796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGACATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTTTTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

76.2

0.59

0.9

73.2

36.4

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

79.3

0.92

85.48

26.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045265

39924952 - 39946431

21480

ENSAPLT00000038017

39924952 - 39928277

3326