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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39927276_39927944_F

Intron Information:

Intron Rank:

136752

Intron Class:

major

Intron Phase:

Intron Coordinates:

39927276 - 39927944

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTGTCCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTACAGCAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.3

77.9

38.6

Major BPS

68.8

0.47

1.2

63.4

Major PPT

79.4

0.66

0.8

77.9

30.9

Minor 5ss

38.3

-1.3

2.8

46.9

41.8

Minor BPS

43.3

-0.6

2.4

57.71

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038017

39924952 - 39928277

3326

ENSAPLT00000025346

39921290 - 39928277

6988

ENSAPLT00000017896

39926260 - 39928277

2018