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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39927276_39946356_F

Intron Information:

Intron Rank:

136761

Intron Class:

major

Intron Phase:

Intron Coordinates:

39927276 - 39946356

Intron Length:

19081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTCTTCTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.3

77.9

38.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

38.3

-1.3

2.8

46.9

41.8

Minor BPS

-0.2

3.6

82.89

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045265

39924952 - 39946431

21480