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Intron Name: Anas_platyrhynchos_platyrhynchos_2_399370_406492_R

Intron Information:

Intron Rank:

131297

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

399370 - 406492

Intron Length:

7123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGGA

5'SS Class:

major

3'SS Sequence:

TATTTTGAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

64.5

41.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.8

0.2

1.2

61.3

42.7

Minor 5ss

-2.6

3.1

32.5

42.2

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043737

399022 - 407208

8187