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Intron Name: Anas_platyrhynchos_platyrhynchos_2_3995774_4012993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3995774 - 4012993

Intron Length:

17220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

AATTTTAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTGTTAATT

Flanking Amino Acid:

KKSENWLSGLRKSPTPTWNK

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.6

0.44

64.6

40.7

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

0.74

91.07

32.9

Associated Gene:

Gene:

MINDY4

Ensembl Gene ID:

ENSAPLG00000011415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034180

3927862 - 4019824

91963

ENSAPLT00000011886

3943432 - 4019824

76393