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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40279262_40281306_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40279262 - 40281306

Intron Length:

2045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCCACTGAACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

ATCCACTGAACT

Flanking Amino Acid:

KKTPKSTPSKVRYWDCVLQC

Intron Amino Acid Position:

1577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.2

82.3

32.2

Major BPS

0.47

1.2

61.1

45.5

Major PPT

54.3

0.1

47.6

39.4

Minor 5ss

40.2

-1.1

2.8

44.1

Minor BPS

57.4

0.31

1.7

74.35

41.6

Associated Gene:

Gene:

TOP2B

Ensembl Gene ID:

ENSAPLG00000006835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035082

40279169 - 40343066

63898