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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40281071_40281306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40281071 - 40281306

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

AGCTTCACAACT

Flanking Amino Acid:

KKTPKSTPSKKSKKAAFDQD

Intron Amino Acid Position:

1577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.2

82.3

32.2

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

75.8

0.58

78.1

28.1

Minor 5ss

40.2

-1.1

2.8

44.1

Minor BPS

49.5

0.04

1.8

68.25

42.2

Associated Gene:

Gene:

TOP2B

Ensembl Gene ID:

ENSAPLG00000006835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007261

40280502 - 40343149

62648