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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40286275_40287512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40286275 - 40287512

Intron Length:

1238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

TAACTTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GATGCTTTAACT

Flanking Amino Acid:

PKIKREKKEPGTRVRRTPSS

Intron Amino Acid Position:

1318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

33.2

Major BPS

77.3

0.68

79.3

29.4

Major PPT

75.2

0.57

68.5

41.6

Minor 5ss

39.3

-1.2

49.1

41.1

Minor BPS

73.2

0.8

1.3

81.83

39.6

Associated Gene:

Gene:

TOP2B

Ensembl Gene ID:

ENSAPLG00000006835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035082

40279169 - 40343066

63898

ENSAPLT00000025844

40119718 - 40343149

223432

ENSAPLT00000007261

40280502 - 40343149

62648

ENSAPLT00000039859

40279990 - 40343066

63077