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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40302974_40303185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40302974 - 40303185

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTA

5'SS Class:

major

3'SS Sequence:

TTTTGTTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTGTTATACA

Flanking Amino Acid:

HKAWKIKYYKGLGTSTAKEA

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

77.9

32.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.3

0.79

0.9

80.6

36.1

Minor 5ss

46.2

-0.4

2.4

58.8

45.7

Minor BPS

48.1

-0.1

2.3

70.62

41.9

Associated Gene:

Gene:

TOP2B

Ensembl Gene ID:

ENSAPLG00000006835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039859

40279990 - 40343066

63077

ENSAPLT00000035082

40279169 - 40343066

63898

ENSAPLT00000025844

40119718 - 40343149

223432

ENSAPLT00000007261

40280502 - 40343149

62648