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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40316310_40316390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40316310 - 40316390

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGAACC

5'SS Class:

major

3'SS Sequence:

GTGTCACTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TAATTGCTATCT

Flanking Amino Acid:

KVMLNGKKLPVNGFRSYVDL

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

65.9

38.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

65.3

0.34

0.9

58.4

37.5

Minor 5ss

37.7

-1.4

55.4

41.3

Minor BPS

43.4

-0.4

2.4

66.37

43.9

Associated Gene:

Gene:

TOP2B

Ensembl Gene ID:

ENSAPLG00000006835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035082

40279169 - 40343066

63898

ENSAPLT00000025844

40119718 - 40343149

223432

ENSAPLT00000007261

40280502 - 40343149

62648

ENSAPLT00000039859

40279990 - 40343066

63077