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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40328818_40342982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40328818 - 40342982

Intron Length:

14165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

ATCAGGTTGATT

Flanking Amino Acid:

GGGSGGLTWVTLFDNQISAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

-0.4

2.4

61.36

43.1

Associated Gene:

Gene:

TOP2B

Ensembl Gene ID:

ENSAPLG00000006835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039859

40279990 - 40343066

63077

ENSAPLT00000035082

40279169 - 40343066

63898

ENSAPLT00000025844

40119718 - 40343149

223432

ENSAPLT00000007261

40280502 - 40343149

62648