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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4047825_4048313_F

Intron Information:

Intron Rank:

143469

Intron Class:

major

Intron Phase:

Intron Coordinates:

4047825 - 4048313

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

AATTCTGTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

86.1

0.81

0.8

80.1

37.1

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

53.5

0.19

73.5

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045716

4047632 - 4049153

1522