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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40494815_40500918_F

Intron Information:

Intron Rank:

141017

Intron Class:

major

Intron Phase:

Intron Coordinates:

40494815 - 40500918

Intron Length:

6104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGATAA

5'SS Class:

major

3'SS Sequence:

GTTTCTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TAAACACTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.3

65.2

37.3

Major BPS

78.6

0.71

78.6

Major PPT

77.9

0.63

0.9

Minor 5ss

39.1

-1.2

3.1

51.8

45.1

Minor BPS

49.3

-0

64.14

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027508

40494679 - 40503637

8959