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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40558251_40559996_R

Intron Information:

Intron Rank:

133716

Intron Class:

major

Intron Phase:

Intron Coordinates:

40558251 - 40559996

Intron Length:

1746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GCAATTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

46.9

-0.1

1.6

58.29

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036228

40549523 - 40560072

10550