Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40920989 - 40921683

Intron Length:

695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TTGAAATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTACTTGAAAT

Flanking Amino Acid:

EDDKKKKEKAEAERMLQTGD

Intron Amino Acid Position:

1119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.6

34.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

73.6

0.53

65.7

44.2

Minor 5ss

38.5

-1.3

3.3

54.7

43.6

Minor BPS

64.8

0.54

1.6

83.28

37.1

Associated Gene:

Gene:

SLC4A7

Ensembl Gene ID:

ENSAPLG00000004253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025739

40756860 - 40968808

211949

ENSAPLT00000042560

40919156 - 40968808

49653

ENSAPLT00000019964

40917152 - 40968808

51657

ENSAPLT00000034918

40917152 - 40968808

51657

ENSAPLT00000018499

40918313 - 41023690

105378

ENSAPLT00000029136

40918313 - 40990694

72382

ENSAPLT00000045188

40918313 - 41010830

92518

ENSAPLT00000004504

40918335 - 40968808

50474

ENSAPLT00000026437

40917152 - 40999537

82386

ENSAPLT00000044648

40918313 - 40968808

50496

Intron Name: Anas_platyrhynchos_platyrhynchos_2_40920989_40921683_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: