Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40927112 - 40928899

Intron Length:

1788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TCTGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAA

U12 Branch Point Sequence:

ATGACTAGAAAT

Flanking Amino Acid:

TIVWSNLTVSECLEFHGVFR

Intron Amino Acid Position:

764

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

74.7

35.4

Major BPS

70.7

0.51

0.9

61.7

35.7

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

37.8

-1.4

55.7

41.6

Minor BPS

45.3

-0.2

1.8

62.66

40.8

Associated Gene:

Gene:

SLC4A7

Ensembl Gene ID:

ENSAPLG00000004253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025739

40756860 - 40968808

211949

ENSAPLT00000042560

40919156 - 40968808

49653

ENSAPLT00000019964

40917152 - 40968808

51657

ENSAPLT00000034918

40917152 - 40968808

51657

ENSAPLT00000018499

40918313 - 41023690

105378

ENSAPLT00000029136

40918313 - 40990694

72382

ENSAPLT00000045188

40918313 - 41010830

92518

ENSAPLT00000004504

40918335 - 40968808

50474

ENSAPLT00000026437

40917152 - 40999537

82386

ENSAPLT00000044648

40918313 - 40968808

50496

Intron Name: Anas_platyrhynchos_platyrhynchos_2_40927112_40928899_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: