Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_40943259_40943993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40943259 - 40943993

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TTTGTATGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ACTTGTTTAATT

Flanking Amino Acid:

TLGVGLKRPSVDMNFMRKIP

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

66.3

0.37

1.1

63.1

42.2

Minor 5ss

45.8

-0.4

2.8

69.7

40.4

Minor BPS

64.1

0.52

1.7

77.48

Associated Gene:

Gene:

SLC4A7

Ensembl Gene ID:

ENSAPLG00000004253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044648

40918313 - 40968808

50496