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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40943259_40944732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40943259 - 40944732

Intron Length:

1474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ACTTGTTTAATT

Flanking Amino Acid:

RENSTVDFSKVDMNFMRKIP

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

66.3

0.37

1.1

63.1

42.2

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

64.1

0.52

1.7

77.48

Associated Gene:

Gene:

SLC4A7

Ensembl Gene ID:

ENSAPLG00000004253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025739

40756860 - 40968808

211949

ENSAPLT00000042560

40919156 - 40968808

49653

ENSAPLT00000019964

40917152 - 40968808

51657

ENSAPLT00000034918

40917152 - 40968808

51657

ENSAPLT00000018499

40918313 - 41023690

105378

ENSAPLT00000029136

40918313 - 40990694

72382

ENSAPLT00000004504

40918335 - 40968808

50474

ENSAPLT00000026437

40917152 - 40999537

82386

ENSAPLT00000045188

40918313 - 41010830

92518