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Intron Name: Anas_platyrhynchos_platyrhynchos_2_40944849_40952996_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40944849 - 40952996

Intron Length:

8148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTAATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATC

Flanking Amino Acid:

HSDPHLLERNGLLASPQSAP

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

71.8

28.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.8

0.56

0.9

42.2

Minor 5ss

31.9

-2.1

42.5

Minor BPS

0.7

1.1

78.22

31.1

Associated Gene:

Gene:

SLC4A7

Ensembl Gene ID:

ENSAPLG00000004253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026437

40917152 - 40999537

82386

ENSAPLT00000025739

40756860 - 40968808

211949

ENSAPLT00000018499

40918313 - 41023690

105378

ENSAPLT00000045188

40918313 - 41010830

92518

ENSAPLT00000029136

40918313 - 40990694

72382