Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40957830 - 40968726

Intron Length:

10897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

ACTTTCTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TCCTCTTGAACT

Flanking Amino Acid:

NTNFEKEELESHRAVYIGVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

72.5

39.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

64.9

0.34

1.2

67.2

37.8

Minor 5ss

45.1

-0.5

2.8

54.8

43.4

Minor BPS

69.8

0.7

1.4

80.32

41.9

Associated Gene:

Gene:

SLC4A7

Ensembl Gene ID:

ENSAPLG00000004253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025739

40756860 - 40968808

211949

ENSAPLT00000042560

40919156 - 40968808

49653

ENSAPLT00000019964

40917152 - 40968808

51657

ENSAPLT00000034918

40917152 - 40968808

51657

ENSAPLT00000018499

40918313 - 41023690

105378

ENSAPLT00000029136

40918313 - 40990694

72382

ENSAPLT00000045188

40918313 - 41010830

92518

ENSAPLT00000004504

40918335 - 40968808

50474

ENSAPLT00000026437

40917152 - 40999537

82386

ENSAPLT00000044648

40918313 - 40968808

50496

Intron Name: Anas_platyrhynchos_platyrhynchos_2_40957830_40968726_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: