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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41075846_41076261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41075846 - 41076261

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGC

5'SS Class:

strong_major

3'SS Sequence:

TGGTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTGATTTAGCA

Flanking Amino Acid:

NKGANNNNAQMIVLQSLHKY

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

36.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.9

0.7

0.9

77.7

36.7

Minor 5ss

32.4

-2

3.3

43.9

Minor BPS

55.6

0.17

1.8

72.03

40.3

Associated Gene:

Gene:

EOMES

Ensembl Gene ID:

ENSAPLG00000022951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027116

41073036 - 41077545

4510

ENSAPLT00000026506

41073036 - 41077545

4510