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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41099073_41117369_R

Intron Information:

Intron Rank:

130589

Intron Class:

major

Intron Phase:

Intron Coordinates:

41099073 - 41117369

Intron Length:

18297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

ATGCTCTGCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

81.3

0.7

0.8

75.8

32.9

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

48.3

-0

1.9

68.36

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044784

41095624 - 41117951

22328