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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4113672_4119527_F

Intron Information:

Intron Rank:

128748

Intron Class:

major

Intron Phase:

Intron Coordinates:

4113672 - 4119527

Intron Length:

5856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TGTTTTTTGTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

38.6

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

0.74

0.8

81.2

36.5

Minor 5ss

41.6

-0.9

3.2

56.7

47.6

Minor BPS

44.5

-0.3

3.4

74.33

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033435

4111737 - 4119663

7927