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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41185781_41187038_R

Intron Information:

Intron Rank:

135184

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41185781 - 41187038

Intron Length:

1258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGATACAACACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTTCTTTTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

85.1

25.6

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

59.1

0.21

51.6

41.4

Minor 5ss

34.4

-1.8

2.9

46.9

41.8

Minor BPS

80.4

1.04

1.5

96.11

29.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024659

41173301 - 41187636

14336