Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_41215423_41251453_R

Intron Information:

Intron Rank:

143969

Intron Class:

major

Intron Phase:

Intron Coordinates:

41215423 - 41251453

Intron Length:

36031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TGTCTGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCTAT

U12 Branch Point Sequence:

TATTCTATGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

63.8

43.3

Major BPS

0.37

1.3

64.5

42.5

Major PPT

79.3

0.66

0.9

77.1

37.1

Minor 5ss

41.8

-0.9

2.8

54.9

43.3

Minor BPS

54.2

0.21

1.9

76.83

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026436

41215252 - 41252185

36934