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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41239993_41242549_F

Intron Information:

Intron Rank:

131991

Intron Class:

major

Intron Phase:

Intron Coordinates:

41239993 - 41242549

Intron Length:

2557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCTTA

5'SS Class:

major

3'SS Sequence:

GTTCTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

39.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

86.2

0.81

0.8

80.7

31.3

Minor 5ss

46.4

-0.4

3.1

46.2

Minor BPS

83.3

0.91

1.1

82.74

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036515

41239811 - 41243301

3491

ENSAPLT00000031233

41234659 - 41243301

8643