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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41298163_41301655_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41298163 - 41301655

Intron Length:

3493

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTATTTAAAA

Flanking Amino Acid:

LKTSSTPTKKAASSAPVQCV

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.8

73.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

96.3

1.04

0.5

95.7

14.9

Minor 5ss

23.2

-3.1

3.6

31.4

42.8

Minor BPS

65.7

0.49

1.6

75.12

35.5

Associated Gene:

Gene:

AZI2

Ensembl Gene ID:

ENSAPLG00000023912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048216

41297458 - 41316430

18973

ENSAPLT00000031782

41297458 - 41316430

18973