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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41381250_41381738_F

Intron Information:

Intron Rank:

132034

Intron Class:

major

Intron Phase:

Intron Coordinates:

41381250 - 41381738

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTGAAT

U12 Branch Point Sequence:

CCTGCCTGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

49.8

-0

1.4

61.2

Major PPT

86.5

0.82

0.6

85.2

22.1

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

57.2

0.2

1.6

62.53

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042428

41379344 - 41381916

2573