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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41382505_41382679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

41382505 - 41382679

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCTGTGT

5'SS Class:

major

3'SS Sequence:

TCTCGCCACGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGGAA

U12 Branch Point Sequence:

TGTCTCGCCACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.1

59.5

41.8

Major BPS

48.8

-0

1.5

49.1

46.3

Major PPT

68.2

0.41

0.9

33.7

Minor 5ss

-2.1

3.5

47.5

47.9

Minor BPS

39.1

-1

2.4

49.3

44.3

Associated Gene:

Gene:

RBMS3

Ensembl Gene ID:

ENSAPLG00000012270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035141

41382348 - 42074119

691772