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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41638983_41735148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41638983 - 41735148

Intron Length:

96166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCGC

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

AGCCCAGTAACA

Flanking Amino Acid:

YYYPHYLQTKQSYAPAPHPM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

60.9

40.7

Major BPS

54.4

0.11

1.2

36.4

Major PPT

88.2

0.86

0.8

80.5

Minor 5ss

29.7

-2.3

3.5

41.4

45.3

Minor BPS

45.6

-0.3

2.2

57.43

41.4

Associated Gene:

Gene:

RBMS3

Ensembl Gene ID:

ENSAPLG00000012270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035175

41638541 - 42074119

435579