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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4177205_4211950_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4177205 - 4211950

Intron Length:

34746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCAATGCAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAATG

Flanking Amino Acid:

EALSARTNVTGPYCNATTDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

52.7

0.06

1.2

40.4

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

64.5

0.32

1.5

70.72

37.1

Associated Gene:

Gene:

CRHR2

Ensembl Gene ID:

ENSAPLG00000011160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025127

4163283 - 4323068

159786

ENSAPLT00000022712

4163283 - 4323068

159786