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Intron Name: Anas_platyrhynchos_platyrhynchos_2_41987195_41996599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41987195 - 41996599

Intron Length:

9405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TAACTATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TCTCCCCTAACT

Flanking Amino Acid:

NGRPWPREGEAGMALTYDPT

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

68.5

0.42

1.1

62.4

42.8

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

70.5

0.72

1.7

86.59

38.8

Associated Gene:

Gene:

RBMS3

Ensembl Gene ID:

ENSAPLG00000012270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012776

41483807 - 42073415

589609

ENSAPLT00000038656

41382680 - 42067514

684835

ENSAPLT00000035175

41638541 - 42074119

435579

ENSAPLT00000035141

41382348 - 42074119

691772

ENSAPLT00000024427

41382680 - 42074119

691440