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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42004127_42039555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42004127 - 42039555

Intron Length:

35429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TATGTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

AAATGTTGAAGT

Flanking Amino Acid:

IAASPVSTYQGAVITPTMDH

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

43.5

Major BPS

75.6

0.64

1.5

34.5

Major PPT

79.7

0.67

0.9

73.2

41.7

Minor 5ss

32.5

-2

3.1

40.5

45.6

Minor BPS

45.2

-0.2

2.1

61.19

42.4

Associated Gene:

Gene:

RBMS3

Ensembl Gene ID:

ENSAPLG00000012270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024427

41382680 - 42074119

691440