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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42039667_42066841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42039667 - 42066841

Intron Length:

27175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTATTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGCCTTCAATT

Flanking Amino Acid:

NHLSLGTTGTYMTAAAPMQG

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.3

32.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.5

0.71

0.8

74.9

39.6

Minor 5ss

37.7

-1.4

3.1

48.1

47.5

Minor BPS

62.8

0.48

1.5

77.51

39.4

Associated Gene:

Gene:

RBMS3

Ensembl Gene ID:

ENSAPLG00000012270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012776

41483807 - 42073415

589609

ENSAPLT00000038656

41382680 - 42067514

684835

ENSAPLT00000035175

41638541 - 42074119

435579

ENSAPLT00000035141

41382348 - 42074119

691772

ENSAPLT00000024427

41382680 - 42074119

691440