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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42150516_42152269_F

Intron Information:

Intron Rank:

127940

Intron Class:

major

Intron Phase:

Intron Coordinates:

42150516 - 42152269

Intron Length:

1754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATCCCCTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTGTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

84.6

33.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

78.5

0.64

0.8

69.3

36.2

Minor 5ss

-0.3

2.9

67.1

37.8

Minor BPS

60.6

0.41

2.3

87.15

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030669

42149492 - 42152706

3215