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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42196332_42196442_R

Intron Information:

Intron Rank:

131045

Intron Class:

major

Intron Phase:

Intron Coordinates:

42196332 - 42196442

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATAGCTGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

76.4

0.59

0.9

68.9

37.3

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

0.2

2.1

74.74

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042274

42193541 - 42196811

3271