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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42252684_42260838_F

Intron Information:

Intron Rank:

142101

Intron Class:

major

Intron Phase:

Intron Coordinates:

42252684 - 42260838

Intron Length:

8155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TCCACCTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

75.1

0.62

65.6

Major PPT

82.6

0.73

0.7

78.3

30.6

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

62.8

0.48

1.8

76.23

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036291

42252566 - 42261691

9126

ENSAPLT00000018646

42252566 - 42261691

9126