Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_42324009_42332068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42324009 - 42332068

Intron Length:

8060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

GTTTGCTTATTC

Flanking Amino Acid:

EMTSRCNGVGEVKEYEPPFG

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

76.8

0.6

73.5

36.3

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

56.7

0.19

70.84

40.9

Associated Gene:

Gene:

TGFBR2

Ensembl Gene ID:

ENSAPLG00000012100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025526

42279829 - 42337083

57255

ENSAPLT00000012612

42279829 - 42337083

57255