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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42491754_42513117_R

Intron Information:

Intron Rank:

132621

Intron Class:

major

Intron Phase:

Intron Coordinates:

42491754 - 42513117

Intron Length:

21364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

GTTAGCGCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

0.81

0.7

77.8

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

44.3

-0.3

2.5

69.88

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018597

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044580

42488371 - 42513345

24975