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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42626135_42627854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42626135 - 42627854

Intron Length:

1720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTTTCCCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGTAT

U12 Branch Point Sequence:

GGTAATATAGTA

Flanking Amino Acid:

YPLGRIVGGTVYPGLMVTAG

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

0.03

1.4

51.8

43.6

Major PPT

84.2

0.77

0.6

82.6

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

40.4

-0.7

1.8

47.91

35.6

Associated Gene:

Gene:

STT3B

Ensembl Gene ID:

ENSAPLG00000010692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026940

42601778 - 42649337

47560

ENSAPLT00000023042

42601778 - 42653920

52143

ENSAPLT00000011208

42601778 - 42653202

51425