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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42628143_42629886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42628143 - 42629886

Intron Length:

1744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTATTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATAAAT

Flanking Amino Acid:

FALQFTYYLWVKSVKTGSVF

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

74.4

0.55

1.1

74.6

39.1

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

64.2

0.52

1.7

83.16

37.1

Associated Gene:

Gene:

STT3B

Ensembl Gene ID:

ENSAPLG00000010692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011208

42601778 - 42653202

51425

ENSAPLT00000026940

42601778 - 42649337

47560

ENSAPLT00000023042

42601778 - 42653920

52143